Manager Currently does not have a feature for withholding VAT. WHV is not common so you have to improvise. In Ghana, only Large corporate organisations and some large public sector organisations are given the right to withhold VAT.
Take note that WHV does not reduce VAT-inclusive sales. So create an Asset account for recording WHV. Introduce a line and enter negative numbers for this account to record WHV.
You can use a journal entry to credit the WHV account and debit the VAT liability account to realise the WHV or simply enter a negative number for the WHV asset account on a separate line when making VAT returns payment to GRA to zero out the WHV receivable account (to reduce your tax paid).